6KKS
Structural insights into target DNA recognition by R2R3-type MYB transcription factor
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U1 |
| Synchrotron site | SSRF |
| Beamline | BL17U1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-05-31 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 0.97915 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 52.084, 63.927, 73.956 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.000 - 2.150 |
| R-factor | 0.215 |
| Rwork | 0.214 |
| R-free | 0.24560 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1h8a |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.149 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 48.364 | 48.364 | 2.280 |
| High resolution limit [Å] | 2.150 | 6.400 | 2.150 |
| Rmerge | 0.105 | 0.043 | 0.935 |
| Rmeas | 0.109 | 0.045 | 0.969 |
| Total number of observations | 198226 | ||
| Number of reflections | 13918 | 590 | 2214 |
| <I/σ(I)> | 21.04 | 55.3 | 3.5 |
| Completeness [%] | 99.6 | 99.2 | 100 |
| Redundancy | 14.242 | 12.627 | 14.374 |
| CC(1/2) | 0.999 | 0.999 | 0.924 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1M MES pH 6.0, 30%(v/v) PEG600, 5%(w/v) PEG1000 and 10%(v/v) Glycerol |






