6KCQ

Crystal structure of yedK with ssDNA containing an abasic site

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SSRF BEAMLINE BL19U1
Synchrotron site	SSRF
Beamline	BL19U1
Temperature [K]	100
Detector technology	PIXEL
Collection date	2019-01-08
Detector	DECTRIS PILATUS3 S 6M
Wavelength(s)	0.979
Spacegroup name	P 43
Unit cell lengths	70.671, 70.671, 44.423
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	37.610 - 1.701
R-factor	0.1624
Rwork	0.160
R-free	0.20400
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	6kbs
RMSD bond length	0.007
RMSD bond angle	0.885
Data reduction software	HKL-3000
Data scaling software	HKL-3000
Phasing software	PHASES
Refinement software	PHENIX ((1.12_2829: ???))

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	40.000	1.760
High resolution limit [Å]	1.700	1.700
Rmerge	0.081	0.409
Rpim	0.027	0.220
Number of reflections	24080	2271
<I/σ(I)>	23
Completeness [%]	99.1	94.3
Redundancy	8.4	3.7
CC(1/2)	0.999	0.444

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	EVAPORATION		293	0.05M calcium chloride dihydrate 0.1M Bis-Tris pH6.5 30% MPEG550