6JZK
Structure of FimA type-1 (FimA1) prepilin of the type V major fimbrium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-16 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 35.840, 85.452, 242.561 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.726 - 2.100 |
R-factor | 0.1915 |
Rwork | 0.189 |
R-free | 0.24000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jzj |
RMSD bond length | 0.007 |
RMSD bond angle | 0.818 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.500 | 2.160 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.050 | 0.397 |
Rmeas | 0.059 | 0.468 |
Rpim | 0.031 | 0.244 |
Number of reflections | 44884 | 3585 |
<I/σ(I)> | 21.3 | 4.4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.6 | 6.9 |
CC(1/2) | 0.999 | 0.949 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 293 | 0.1M Sodium citrate pH5.6, 1.8M ammonium sulfate, 0.2M sodium potassium tartrate |