6JXD
Human nucleosome core particle with cohesive end DNA termini
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06DA |
| Synchrotron site | SLS |
| Beamline | X06DA |
| Temperature [K] | 98.15 |
| Detector technology | PIXEL |
| Collection date | 2017-09-18 |
| Detector | DECTRIS PILATUS 2M-F |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 105.310, 109.660, 183.819 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 92.080 - 2.250 |
| R-factor | 0.23975 |
| Rwork | 0.239 |
| R-free | 0.29225 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2nzd |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.496 |
| Data reduction software | iMOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 94.180 | 2.370 |
| High resolution limit [Å] | 2.250 | 2.250 |
| Rpim | 0.030 | 0.760 |
| Number of reflections | 101214 | 14272 |
| <I/σ(I)> | 12.2 | |
| Completeness [%] | 99.7 | |
| Redundancy | 11.5 | |
| CC(1/2) | 0.997 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291.15 | manganese chloride, potassium chloride, potassium cacodylate |






