6JW2
Universal RVD R* accommodates 5hmC via water-mediated interactions
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-11-03 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 94.517, 93.776, 167.749 |
Unit cell angles | 90.00, 102.66, 90.00 |
Refinement procedure
Resolution | 163.670 - 3.030 |
R-factor | 0.2385 |
Rwork | 0.237 |
R-free | 0.26140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4gjp |
RMSD bond length | 0.010 |
RMSD bond angle | 1.461 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 163.670 | 3.110 |
High resolution limit [Å] | 3.030 | 3.030 |
Rmeas | 0.118 | 0.118 |
Number of reflections | 44929 | |
<I/σ(I)> | 2 | |
Completeness [%] | 98.8 | |
Redundancy | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 8-10% PEG3350 (w/v), 10% ethanol and 0.1M MES pH 6.7 |