6JUV
Crytsal structure of ScpB derived from Pyrococcus yayanosii
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 5C (4A) |
| Synchrotron site | PAL/PLS |
| Beamline | 5C (4A) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-07-24 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.9794 |
| Spacegroup name | P 41 2 2 |
| Unit cell lengths | 92.300, 92.300, 111.817 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 92.300 - 3.043 |
| R-factor | 0.2387 |
| Rwork | 0.236 |
| R-free | 0.26490 |
| Structure solution method | SAD |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.495 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | PHENIX (1.10.1_2155) |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 92.300 | 3.250 |
| High resolution limit [Å] | 3.040 | 3.040 |
| Rmerge | 0.171 | 0.386 |
| Rmeas | 0.172 | 0.387 |
| Rpim | 0.017 | 0.035 |
| Number of reflections | 9802 | 1721 |
| <I/σ(I)> | 34.3 | 20.2 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 113.1 | 118.9 |
| CC(1/2) | 0.999 | 0.998 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 295 | 35% (v/v) pentaerythritol propoxylate (5/4 PO/OH), 0.1M MES (pH 5.5), 0.4M sodium chloride |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 295 | 35% (v/v) pentaerythritol propoxylate (5/4 PO/OH), 0.1M MES (pH 5.5), 0.4M sodium chloride |






