6JST
Structure of Geobacillus kaustophilus lactonase, Y99P/D266N double mutant with bound 3-oxo-C8-HSL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-26 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 |
Unit cell lengths | 50.991, 51.187, 134.473 |
Unit cell angles | 90.99, 91.33, 96.33 |
Refinement procedure
Resolution | 19.986 - 1.726 |
R-factor | 0.221 |
Rwork | 0.219 |
R-free | 0.26390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4h9u |
RMSD bond length | 0.012 |
RMSD bond angle | 0.910 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.7.17) |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.917 | 44.917 | 1.830 |
High resolution limit [Å] | 1.730 | 5.160 | 1.730 |
Rmerge | 0.048 | 0.027 | 0.212 |
Rmeas | 0.067 | 0.039 | 0.300 |
Total number of observations | 468131 | ||
Number of reflections | 142028 | 9801 | 33338 |
<I/σ(I)> | 10.73 | 21.19 | 2.83 |
Completeness [%] | 83.8 | 92.2 | 72.8 |
Redundancy | 1.975 | 1.984 | 1.919 |
CC(1/2) | 0.995 | 0.995 | 0.888 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 17.00% w/v PEG 20000, 0.10 M TRIS-HCl, pH 8.5, 0.10 M MgCl2 |