Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JQF

Crystallization analysis of a beta-N-acetylhexosaminidase (Am2136) from Akkermansia muciniphila

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-21
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9792
Spacegroup nameI 2 2 2
Unit cell lengths108.819, 114.548, 128.073
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.720 - 1.900
R-factor0.1604
Rwork0.159
R-free0.18920
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwareMoRDa
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.660
High resolution limit [Å]1.6003.4501.600
Rmerge0.1280.0981.099
Rmeas0.1330.1031.148
Rpim0.0380.0290.331
Number of reflections622101065210338
<I/σ(I)>8.9
Completeness [%]99.898.8100
Redundancy12.212.511.9
CC(1/2)0.9920.885
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52890.2 M magnesium chloride hexahydrate, 0.1 M HEPES pH 7.5; 25% PEG3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon