6JMP
Crystal Structure of a Non-hemolytic Pneumolysin from Streptococcus pneumoniae strain ST306
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE BM14 |
| Synchrotron site | ESRF |
| Beamline | BM14 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-04-29 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.95372 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 24.480, 84.730, 214.620 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 38.290 - 2.200 |
| R-factor | 0.226 |
| Rwork | 0.224 |
| R-free | 0.26600 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5cr6 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.354 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 38.290 | 2.250 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.240 | 1.318 |
| Number of reflections | 23881 | 7414 |
| <I/σ(I)> | 10.56 | 2.7 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 11.7 | 12.1 |
| CC(1/2) | 0.996 | 0.843 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295 | 6 MM PHOSPHOCHOLINE, 0.2 M MGCL2, 20% PEG 3350 |






