6JLH
Structure of SCGN in complex with a Snap25 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97921 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 104.524, 107.049, 54.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.960 - 2.370 |
R-factor | 0.2034 |
Rwork | 0.200 |
R-free | 0.23720 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.591 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AutoSol |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.410 |
High resolution limit [Å] | 2.370 | 6.430 | 2.370 |
Rmerge | 0.194 | 0.167 | |
Rmeas | 0.197 | 0.170 | |
Rpim | 0.035 | 0.029 | 0.342 |
Total number of observations | 964927 | ||
Number of reflections | 25808 | 1444 | 1167 |
<I/σ(I)> | 4.6 | ||
Completeness [%] | 99.6 | 100 | 91.8 |
Redundancy | 37.4 | 34.9 | 20.9 |
CC(1/2) | 0.991 | 0.639 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M glycocine, 0.1 M Tris Bicine pH 8.5, 12.5% MPD, 12.5% PEG 1000, 12.5% PEG 3350 |