6JKY
Crystal structure of MvcA-UBE2N-Ub complex from Legionella pneumophila
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-16 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97894 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 104.325, 107.605, 263.845 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.135 - 2.454 |
R-factor | 0.2111 |
Rwork | 0.209 |
R-free | 0.25820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6K11 and 1JAT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.704 |
Data scaling software | autoPROC |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.140 | 2.540 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.066 | 0.547 |
Rmeas | 0.071 | 0.591 |
Number of reflections | 52753 | 7924 |
<I/σ(I)> | 14.9 | |
Completeness [%] | 96.5 | |
Redundancy | 6.5 | |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289.15 | 0.2 M Sodium thiocyanate, 20% w/v Polyethylene glycol 3,350 |