6JKG
The NAD+-free form of human NSDHL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 11C |
Synchrotron site | PAL/PLS |
Beamline | 11C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-31 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9794 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.481, 58.534, 75.601 |
Unit cell angles | 90.00, 108.34, 90.00 |
Refinement procedure
Resolution | 29.801 - 2.900 |
R-factor | 0.231 |
Rwork | 0.228 |
R-free | 0.29070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jkh |
RMSD bond length | 0.006 |
RMSD bond angle | 0.907 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.900 |
High resolution limit [Å] | 2.900 | 2.850 |
Rmerge | 0.084 | 0.287 |
Number of reflections | 9118 | 425 |
<I/σ(I)> | 22.2 | |
Completeness [%] | 98.5 | |
Redundancy | 3.29 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.5 M magnesium chloride, 0.02 M lithium chloride, 33% PEG1000, 0.02 M Glycine, and pH 10.0 |