6IX5
The structure of LepI complex with SAM and its substrate analogue
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-29 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97930 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 161.051, 62.239, 114.150 |
Unit cell angles | 90.00, 113.15, 90.00 |
Refinement procedure
Resolution | 34.987 - 1.700 |
R-factor | 0.1647 |
Rwork | 0.163 |
R-free | 0.18920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ix3 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.343 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX (v1.12_2829) |
Refinement software | PHENIX (v1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.057 | 0.876 |
Rpim | 0.024 | 0.368 |
Number of reflections | 114325 | 5721 |
<I/σ(I)> | 30.7 | |
Completeness [%] | 99.9 | |
Redundancy | 6.6 | |
CC(1/2) | 0.809 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.1M Magnesium chloride hexahydrate, 0.1M ADA(pH 6.5), 12%(w/v) PEG 6000 |