6IJM
Apo structure of the N6-methyl-AMP Deaminase from Arabidopsis thaliana
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-23 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.625, 79.862, 86.853 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.737 - 2.016 |
R-factor | 0.1768 |
Rwork | 0.174 |
R-free | 0.22210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ada |
RMSD bond length | 0.011 |
RMSD bond angle | 0.923 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.071 | 0.553 |
Number of reflections | 23673 | 2287 |
<I/σ(I)> | 20.5 | 2.9 |
Completeness [%] | 98.7 | 98.7 |
Redundancy | 6.4 | 6.4 |
CC(1/2) | 0.999 | 0.876 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 26-36% PEG 3350, 0.2 M NaCl, 0.1 M HEPEs (pH 7.5) |