6IF1
Crystal structure of Ube2K and K48-linked di-ubiquitin complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-12-10 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9796 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.559, 38.792, 190.321 |
Unit cell angles | 90.00, 90.10, 90.00 |
Refinement procedure
Resolution | 47.580 - 2.466 |
R-factor | 0.2163 |
Rwork | 0.215 |
R-free | 0.23560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3k9p |
RMSD bond length | 0.025 |
RMSD bond angle | 2.019 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.510 |
High resolution limit [Å] | 2.466 | 2.470 |
Number of reflections | 22344 | |
<I/σ(I)> | 9.5 | |
Completeness [%] | 99.8 | |
Redundancy | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 10 | 293 | Tris-HCl, polyethylene glycol 3350, ammonium acetate. |