6I4M
Crystal Structure of Plasmodium berghei actin II in the Mg-ADP state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-09-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.031 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 61.410, 61.510, 64.940 |
Unit cell angles | 90.00, 92.55, 90.00 |
Refinement procedure
Resolution | 64.880 - 1.873 |
R-factor | 0.1446 |
Rwork | 0.143 |
R-free | 0.17880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4cbx |
RMSD bond length | 0.011 |
RMSD bond angle | 1.080 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.880 | 1.940 |
High resolution limit [Å] | 1.873 | 1.873 |
Rmerge | 0.038 | 0.295 |
Rmeas | 0.051 | 0.403 |
Rpim | 0.034 | 0.273 |
Number of reflections | 73248 | 4975 |
<I/σ(I)> | 15.1 | |
Completeness [%] | 93.8 | 63.77 |
Redundancy | 1.9 | 1.7 |
CC(1/2) | 0.999 | 0.826 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.3 | 298 | 23% PEG3350, 0.1M BIS-TRIS pH 6.3, 0.2M K-SCN; 20% PEG400 used for cryoprotection |