6HYF
Crystal structure of the third FNIII domain from rat beta4 integrin, a binding site for periaxin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-23 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.996 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.220, 52.840, 144.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.788 - 1.600 |
R-factor | 0.1915 |
Rwork | 0.190 |
R-free | 0.23910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wtw |
RMSD bond length | 0.013 |
RMSD bond angle | 1.051 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.640 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.061 | 2.392 |
Rmeas | 0.073 | 2.839 |
Number of reflections | 51757 | 3746 |
<I/σ(I)> | 8.8 | 0.6 |
Completeness [%] | 98.3 | 98.6 |
Redundancy | 3.3 | 3.3 |
CC(1/2) | 0.998 | 0.166 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | PEG 3350, NH4NO3 |