6HMF
D-family DNA polymerase - DP1 subunit (3'-5' proof-reading exonuclease) H451 proof-reading deficient variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-01-29 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.0427 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.750, 91.240, 143.990 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.190 - 2.600 |
R-factor | 0.229 |
Rwork | 0.227 |
R-free | 0.25500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ihe |
RMSD bond length | 0.009 |
RMSD bond angle | 1.100 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | BUSTER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.000 | 2.720 |
High resolution limit [Å] | 2.600 | 2.600 |
Rpim | 0.647 | |
Number of reflections | 35506 | 4266 |
<I/σ(I)> | 12 | 1.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.5 | 8.8 |
CC(1/2) | 0.617 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.7 | 277 | cacodylate, sodium chloride, PEG 8000, calcium acetate |