6HIT
The crystal structure of haemoglobin from Atlantic cod
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-19 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.91840 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.691, 103.257, 199.352 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.500 |
R-factor | 0.2356 |
Rwork | 0.232 |
R-free | 0.30130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | homology model |
RMSD bond length | 0.013 |
RMSD bond angle | 1.607 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.26) |
Phasing software | PHASER (2.5.5) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 47.200 | 2.590 |
High resolution limit [Å] | 2.500 | 9.680 | 2.500 |
Rmerge | 0.088 | 0.035 | 0.809 |
Rmeas | 0.100 | 0.040 | 0.917 |
Rpim | 0.046 | 0.019 | 0.419 |
Number of reflections | 45021 | 813 | 4302 |
<I/σ(I)> | 10.6 | ||
Completeness [%] | 98.8 | 91.8 | 97.3 |
Redundancy | 4.4 | 3.8 | 4.4 |
CC(1/2) | 0.997 | 0.997 | 0.597 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 0.1 M Bicine, pH 8.5, 12% PEGMME 5K |