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6HFP

Human dihydroorotase mutant F1563T co-crystallized with carbamoyl aspartate at pH 7.0

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2014-02-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0
Spacegroup nameC 2 2 21
Unit cell lengths82.104, 158.948, 61.210
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.494 - 1.198
R-factor0.122501989216
Rwork0.122
R-free0.13667
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4c6i
RMSD bond length0.011
RMSD bond angle1.234
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4941.240
High resolution limit [Å]1.1981.198
Rmeas0.0460.670
Number of reflections12498112167
<I/σ(I)>21.62.6
Completeness [%]99.697.8
Redundancy6.46.2
CC(1/2)0.9990.870
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7291Protein at 2-3 mg/ml in 20 mM Tris pH 8, 0.15 M NaCl, 0.02 mM zinc sulfate, 0.2 mM TCEP with 4 mM carbamoyl asparate. Mother liquor: 2.5-3 M potassium formate, 0.1 M HEPES pH 7.0

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PDB entries from 2024-05-15

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