6HEH
Structure of the catalytic domain of USP28 (insertion deleted)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-08 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | I 41 3 2 |
Unit cell lengths | 189.152, 189.152, 189.152 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.550 - 2.260 |
R-factor | 0.1966 |
Rwork | 0.196 |
R-free | 0.21610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6hei |
RMSD bond length | 0.003 |
RMSD bond angle | 0.600 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.550 | 2.340 |
High resolution limit [Å] | 2.260 | 2.260 |
Rmerge | 0.065 | 0.699 |
Rmeas | 0.068 | 0.752 |
Number of reflections | 27219 | 2698 |
<I/σ(I)> | 19.8 | 2.7 |
Completeness [%] | 99.8 | 99.2 |
Redundancy | 8.6 | 7.5 |
CC(1/2) | 0.999 | 0.827 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.6 | 291 | 12% (w/v) PEG 8000, 100 mM sodium chloride, 200 mM lithium sulfate, 100 mM MES pH 6.6 |