6H9S
Crystal dimeric structure of Petrotoga mobilis lactate dehydrogenase with NADH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-19 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.966000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 91.268, 103.739, 90.700 |
Unit cell angles | 90.00, 107.25, 90.00 |
Refinement procedure
Resolution | 44.501 - 1.900 |
R-factor | 0.1707 |
Rwork | 0.169 |
R-free | 0.19690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1a5z |
RMSD bond length | 0.007 |
RMSD bond angle | 0.774 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.510 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.027 | 0.357 |
Rmeas | 0.039 | |
Number of reflections | 62820 | |
<I/σ(I)> | 2.3 | |
Completeness [%] | 99.0 | |
Redundancy | 1.9 | |
CC(1/2) | 0.999 | 0.749 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | PEG 3350 20%, NaNO3 0.1 M |