6H70
GI.1 human norovirus protruding domain in complex with Nano-62 and 2-fucosyllactose (2FL)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID23-1 |
| Synchrotron site | ESRF |
| Beamline | ID23-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-11-16 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.976250 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 172.170, 89.210, 62.150 |
| Unit cell angles | 90.00, 106.92, 90.00 |
Refinement procedure
| Resolution | 46.760 - 1.830 |
| R-factor | 0.1632 |
| Rwork | 0.162 |
| R-free | 0.19140 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2zl5 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.855 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.760 | 1.890 |
| High resolution limit [Å] | 1.830 | 1.830 |
| Rmerge | 0.050 | 0.423 |
| Rmeas | 0.061 | 0.518 |
| Rpim | 0.035 | 0.294 |
| Number of reflections | 76837 | 7591 |
| <I/σ(I)> | 12.27 | 1.99 |
| Completeness [%] | 96.7 | 96.33 |
| Redundancy | 2.6 | 2.6 |
| CC(1/2) | 0.998 | 0.809 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M sodium citrate (pH 5.5) and 20% (w/v) PEG3000 |






