Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GS3

Crystal Structure of the Uperin-3.5 peptide from Uperoleia mjobergii forming cross-alpha fibril

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2017-04-19
DetectorDECTRIS EIGER R 4M
Wavelength(s)0.9677
Spacegroup nameP 1 21 1
Unit cell lengths19.700, 28.440, 20.320
Unit cell angles90.00, 106.95, 90.00
Refinement procedure
Resolution19.440 - 1.450
R-factor0.189
Rwork0.185
R-free0.22880
Structure solution methodAB INITIO PHASING
RMSD bond length0.016
RMSD bond angle1.783
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareArcimboldo
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.44019.4401.490
High resolution limit [Å]1.4506.4901.450
Rmerge0.0850.0410.601
Rmeas0.0890.0480.648
Number of reflections377748266
<I/σ(I)>15.732.412.72
Completeness [%]97.09694.7
Redundancy10.63610.1047.568
CC(1/2)0.9990.9990.908
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293Reservoir contained 0.1 M KSCN, 0.1 M MES 6.03 pH, 20 %v/v Jeff 600 with cryo-protection of 20% ethylene glycol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon