Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GKL

Translation initiation factor 4E in complex with beta-phosphorothioate trinucleotide mRNA 5' cap diastereomer 2 (m7GppSpApG D2)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-01-19
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9184
Spacegroup nameP 1
Unit cell lengths38.170, 38.180, 147.020
Unit cell angles88.80, 84.67, 76.13
Refinement procedure
Resolution48.795 - 2.200
R-factor0.2195
Rwork0.218
R-free0.25730
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5m7x
RMSD bond length0.006
RMSD bond angle0.951
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.8002.260
High resolution limit [Å]2.2002.200
Rmerge0.1240.415
Rmeas0.1450.555
Number of reflections392002365
<I/σ(I)>6.351.85
Completeness [%]96.175.5
Redundancy3.4781.918
CC(1/2)0.9910.654
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP829116% PEG 10000, 0.1M TrisHCl pH 8.0, 0.2M CH3COONH4

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon