6GKD
human NBD1 of CFTR in complex with nanobodies D12 and G3a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 116.940, 146.830, 188.340 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.430 - 2.990 |
R-factor | 0.1927 |
Rwork | 0.204 |
R-free | 0.23520 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.090 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | BUSTER (2.10.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.430 | 3.099 |
High resolution limit [Å] | 2.992 | 2.992 |
Rmerge | 0.155 | 1.106 |
Rmeas | 0.176 | 1.268 |
Number of reflections | 65508 | |
<I/σ(I)> | 11.4 | |
Completeness [%] | 99.0 | |
Redundancy | 6.7 | |
CC(1/2) | 0.992 | 0.400 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Magnesium chloride hexahydrate, 0.1 M BIS-TRIS pH 6.5, 25% w/v Polyethylene glycol 3,350 |