Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GFZ

pVHL:EloB:EloC in complex with modified VH032 containing (3S,4S)-3-fluoro-4-hydroxyproline (ligand 14b)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2015-12-01
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9795
Spacegroup nameP 41 2 2
Unit cell lengths93.609, 93.609, 364.511
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.010 - 2.300
R-factor0.1974
Rwork0.195
R-free0.24490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5nvv
RMSD bond length0.008
RMSD bond angle1.311
Data reduction softwareXDS
Data scaling softwareAimless (0.3.11)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.01049.0102.350
High resolution limit [Å]2.30011.2702.300
Rmerge0.0850.0300.898
Rmeas0.0910.0330.954
Rpim0.0300.0130.315
Number of reflections733897734441
<I/σ(I)>14.5
Completeness [%]100.098.8100
Redundancy8.86.98.9
CC(1/2)0.9990.9990.820
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.4291PEG 3350, MgOAc, Sodium cacodylate, DTT

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon