6GFX
pVHL:EloB:EloC in complex with modified HIF-1a CODD peptide containing (3R,4S)-3-fluoro-4-hydroxyproline (ligand 13a)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-18 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9763 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 59.258, 59.258, 245.337 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.330 - 1.830 |
R-factor | 0.1846 |
Rwork | 0.183 |
R-free | 0.21240 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.432 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.9) |
Phasing software | REFMAC |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.330 | 1.870 |
High resolution limit [Å] | 1.830 | 1.830 |
Rmerge | 0.095 | 1.083 |
Rmeas | 0.098 | 1.121 |
Rpim | 0.024 | 0.286 |
Number of reflections | 39987 | 2427 |
<I/σ(I)> | 17.8 | |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 17 | 15.2 |
CC(1/2) | 0.999 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 20-22% PEG MME 5000, 0.2 M ammonium sulfate, 0.1 M potassium phosphate, 10 mM DTT |