6GEY
Trypanosoma brucei PTR1 in complex with inhibitor 4g (F125)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-21 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97950 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 74.714, 89.968, 82.761 |
Unit cell angles | 90.00, 115.55, 90.00 |
Refinement procedure
Resolution | 67.410 - 1.560 |
R-factor | 0.17588 |
Rwork | 0.174 |
R-free | 0.21054 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jdc |
RMSD bond length | 0.021 |
RMSD bond angle | 1.985 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.410 | 1.640 |
High resolution limit [Å] | 1.560 | 1.560 |
Rmerge | 0.045 | 0.359 |
Rmeas | 0.065 | 0.472 |
Rpim | 0.037 | 0.277 |
Number of reflections | 125558 | 18613 |
<I/σ(I)> | 9.8 | 2.2 |
Completeness [%] | 89.5 | 91.5 |
Redundancy | 2.6 | 2.4 |
CC(1/2) | 0.998 | 0.888 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 297 | 2-2.5 M sodium acetate, 0.1 M sodium citrate, pH5 |