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6G8R

SP140 PHD-Bromodomain complex with scFv

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-17
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.96861
Spacegroup nameP 61 2 2
Unit cell lengths89.200, 89.200, 343.350
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution64.110 - 2.740
R-factor0.2169
Rwork0.215
R-free0.24920
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2md8 5fbo 5gs3
RMSD bond length0.004
RMSD bond angle1.301
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0257)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]64.11064.1102.810
High resolution limit [Å]2.74012.2502.740
Rmerge0.2250.0373.230
Rmeas0.2370.0393.394
Total number of observations422035
Number of reflections223124712983
<I/σ(I)>8.9340.460.72
Completeness [%]99.598.199.7
Redundancy10.53110.03810.594
CC(1/2)0.9970.9990.442
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72931.2 M sodium malonate, 0.5 % jeffamine ED-2003, 0.1 M HEPES pH 7.0

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PDB entries from 2024-05-15

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