6G3X

Native Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	DIAMOND BEAMLINE I04
Synchrotron site	Diamond
Beamline	I04
Temperature [K]	100
Detector technology	PIXEL
Collection date	2018-02-23
Detector	DECTRIS PILATUS 6M
Wavelength(s)	0.9795
Spacegroup name	P 21 21 21
Unit cell lengths	80.769, 81.213, 167.531
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	83.770 - 2.100
R-factor	0.2237
Rwork	0.221
R-free	0.27378
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	1ebm
RMSD bond length	0.006
RMSD bond angle	1.060
Data reduction software	DIALS
Data scaling software	Aimless
Phasing software	PHASER
Refinement software	REFMAC (5.8.0218)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	83.770	2.090
High resolution limit [Å]	2.060	2.060
Rmerge	0.089	0.879
Rmeas	0.093	0.930
Rpim	0.026	0.299
Number of reflections	68950	3260
<I/σ(I)>	16.9	2
Completeness [%]	99.9	95.7
Redundancy	12.5	9.6
CC(1/2)	0.999	0.334

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	8.5	294	0.12 M Ethylene glycols, 0.1 M Buffer System 3 pH 8.5 and 50 % v/v Precipitant Mix 4 (Morpheus screen, Molecular Dimensions)