6FWU
Crystal structure of human wild type beta-1,4-galactosyltransferase-1 (B4GalT1) in apo-closed dimeric form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-22 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97950 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 60.217, 60.217, 229.368 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.472 - 2.350 |
R-factor | 0.1983 |
Rwork | 0.195 |
R-free | 0.25630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ee3 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.596 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.472 | 2.434 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.323 | 1.655 |
Rmeas | 0.342 | 1.750 |
Rpim | 0.112 | 0.562 |
Number of reflections | 21046 | 2045 |
<I/σ(I)> | 10.48 | 1.78 |
Completeness [%] | 99.8 | 99.51 |
Redundancy | 9.3 | 9.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Potassium Nitrate, 20% (w/v) PEG 3350 |