6FS8
Influenza B/Memphis/13/03 endonuclease with bound inhibitor, baloxavir acid (BXA)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID29 |
| Synchrotron site | ESRF |
| Beamline | ID29 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-09-25 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.254 |
| Spacegroup name | P 43 |
| Unit cell lengths | 59.820, 59.820, 125.890 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 59.860 - 1.800 |
| R-factor | 0.18494 |
| Rwork | 0.183 |
| R-free | 0.21507 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDB:5FML |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.437 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 59.860 | 1.850 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rmerge | 0.064 | 0.471 |
| Number of reflections | 37506 | |
| <I/σ(I)> | 13.6 | 2.6 |
| Completeness [%] | 91.8 | 93.7 |
| Redundancy | 3.6 | 3.4 |
| CC(1/2) | 0.998 | 0.862 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | Protein, at 15-17 mg/ml, was incubated with 10-fold molar excess of BXA for 30 min at RT, mixtures were centrifuged at RT for 5 minutes at 12000 g, and soluble fraction was used for crystallization trials (final protein concentration 8-10 mg/ml). Mother liquor was 0.2 M NaCl, 0.1 M Na(CH3)2AsO2 pH 6.5, 2 M (NH4)2SO4 |






