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6FNH

Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with a pyrazolo[3,4-d]pyrimidine fragment of NVP-BHG712

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2016-09-15
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.03318
Spacegroup nameP 21 21 21
Unit cell lengths56.500, 90.674, 200.316
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.953 - 1.379
R-factor0.2056
Rwork0.206
R-free0.22120
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5i9u
RMSD bond length0.008
RMSD bond angle0.958
Data reduction softwareXDS (XDSapp 2.0)
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.2101.460
High resolution limit [Å]1.3791.379
Rmeas0.095
Number of reflections21208933386
<I/σ(I)>10.570.22
Completeness [%]99.698
Redundancy13.0312.67
CC(1/2)0.9990.109
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529137.5 % MPD/PEG1000/PEG3350 (MD), 0.075 M Carboxylic Acids Mix (MD), 0.1 M Buffer System 3 (MD) pH 8.5

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