6FKN
Drosophila Plexin A in complex with Semaphorin 1b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-01 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0719 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 153.630, 153.630, 425.370 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 133.047 - 4.801 |
R-factor | 0.2854 |
Rwork | 0.285 |
R-free | 0.29700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6kfm |
RMSD bond length | 0.005 |
RMSD bond angle | 0.811 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13rc2_2986: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 133.047 | 4.970 |
High resolution limit [Å] | 4.801 | 4.801 |
Rmerge | 0.339 | |
Number of reflections | 15309 | |
<I/σ(I)> | 7.41 | |
Completeness [%] | 99.9 | |
Redundancy | 20.9 | |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M MES and 12% (w/v) PEG 20 000 |