6FDU
Structure of Chlamydia trachomatis effector protein Cdu1 bound to Compound 3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-05-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.980 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 44.080, 57.093, 116.381 |
Unit cell angles | 90.00, 96.00, 90.00 |
Refinement procedure
Resolution | 43.840 - 2.300 |
R-factor | 0.20208 |
Rwork | 0.200 |
R-free | 0.23996 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5b5q |
RMSD bond length | 0.015 |
RMSD bond angle | 1.783 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.840 | 2.300 |
High resolution limit [Å] | 2.300 | 2.279 |
Rmerge | 0.047 | |
Rmeas | 0.067 | |
Rpim | 0.047 | |
Number of reflections | 25773 | 2743 |
<I/σ(I)> | 8.96 | |
Completeness [%] | 99.6 | 78.12 |
Redundancy | 2 | 2 |
CC(1/2) | 0.998 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277.15 | 100 mM Bicine pH 9.0, 10% PEG 20000, 2% 1, 4 dioxane |