6EYP
X-ray structure of the unliganded uridine phosphorylase from Vibrio cholerae at 1.22A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-13 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.886 |
Spacegroup name | P 32 |
Unit cell lengths | 92.940, 92.940, 140.231 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 26.480 - 1.220 |
R-factor | 0.138 |
Rwork | 0.138 |
R-free | 0.17000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4oeh |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.6.1) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 26.480 | 1.300 |
High resolution limit [Å] | 1.220 | 1.220 |
Rmerge | 0.124 | 1.065 |
Rmeas | 0.131 | 1.125 |
Total number of observations | 4015025 | |
Number of reflections | 399225 | 63823 |
<I/σ(I)> | 10.75 | 1.88 |
Completeness [%] | 99.7 | 98.6 |
Redundancy | 10.05 | 9.59 |
CC(1/2) | 0.998 | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0,2 M MgCl2,6H2O, 15%(w/v) PEG 4000, 0,1 M TRIS -HCl |