6EMS
Crystal Structure of dual specific Trm10 construct from Thermococcus kodakaraensis.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-23 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9801 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.687, 65.925, 67.044 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.007 - 1.996 |
R-factor | 0.198 |
Rwork | 0.196 |
R-free | 0.23910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5a7y |
RMSD bond length | 0.004 |
RMSD bond angle | 0.617 |
Data reduction software | XDS (2015-10-15) |
Data scaling software | XDS (2015-10-15) |
Phasing software | PHASER (2.5.5) |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.007 | 2.067 |
High resolution limit [Å] | 1.996 | 1.996 |
Rmerge | 0.076 | 2.289 |
Rmeas | 0.078 | 2.348 |
Rpim | 0.017 | 0.514 |
Number of reflections | 20375 | 1976 |
<I/σ(I)> | 24.82 | 1.1 |
Completeness [%] | 100.0 | 99.85 |
Redundancy | 19.9 | 20.1 |
CC(1/2) | 1.000 | 0.821 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 18% PEG3350 and 0.1M Tris pH 7.5 |