6EK7
YaxA from Yersinia enterocolitica
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 203.760, 24.050, 109.420 |
Unit cell angles | 90.00, 113.92, 90.00 |
Refinement procedure
Resolution | 14.950 - 1.800 |
R-factor | 0.1912 |
Rwork | 0.190 |
R-free | 0.22780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SeMet derivative of YaxA |
RMSD bond length | 0.009 |
RMSD bond angle | 0.941 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmeas | 0.055 | 0.550 |
Number of reflections | 45510 | |
<I/σ(I)> | 11.5 | 2 |
Completeness [%] | 97.8 | 97.6 |
Redundancy | 3.7 | |
CC(1/2) | 0.999 | 0.925 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.2 M LiCl; 40% MPD |