6EC8
Glutamylation domain, TbtB, from thiomuracin biosynthesis bound to 5'-phosphodesmethylglutamycin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-04-20 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9787 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 44.503, 96.098, 107.128 |
Unit cell angles | 90.00, 98.84, 90.00 |
Refinement procedure
Resolution | 71.000 - 2.148 |
R-factor | 0.21557 |
Rwork | 0.213 |
R-free | 0.26638 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ec7 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.824 |
Data reduction software | XDS |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 96.100 | 2.185 |
High resolution limit [Å] | 2.148 | 2.148 |
Rmerge | 0.062 | 0.727 |
Rpim | 0.027 | 0.311 |
Number of reflections | 48184 | 2366 |
<I/σ(I)> | 17.6 | |
Completeness [%] | 99.1 | |
Redundancy | 6.4 | |
CC(1/2) | 0.999 | 0.877 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 0.2 M ammonium sulfate, 15% PEG |