6E43
Crystal structure of human indoleamine 2,3-dioxygenase 1 (IDO1) in complex with a BMS-978587 analog
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 80.481, 195.388, 118.223 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.642 - 1.705 |
R-factor | 0.1943 |
Rwork | 0.194 |
R-free | 0.23060 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.900 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.642 | 47.642 | 1.810 |
High resolution limit [Å] | 1.705 | 5.090 | 1.710 |
Rmerge | 0.062 | 0.039 | 0.825 |
Rmeas | 0.071 | 0.045 | 0.941 |
Number of reflections | 201224 | 7958 | 32025 |
<I/σ(I)> | 11.52 | 30.67 | 1.46 |
Completeness [%] | 99.2 | 98.2 | 98.7 |
Redundancy | 4.435 | 4.336 | 4.355 |
CC(1/2) | 0.998 | 0.997 | 0.721 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.2 | 298 | 0.1 M phosphate (pH 6.2), and 15% (w/v) PEG3350 |