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6E2Y

MDDEF in complex with MVAPP, ADP, sulfate and cobalt. Anomalous data

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH2R
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2014-03-14
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 21 21 2
Unit cell lengths79.878, 98.016, 45.872
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.612 - 2.340
R-factor0.1889
Rwork0.187
R-free0.22540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5v2l
RMSD bond length0.010
RMSD bond angle1.004
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.430
High resolution limit [Å]2.3402.350
Rpim0.0220.144
Number of reflections157941541
<I/σ(I)>404.5
Completeness [%]99.599.9
Redundancy12.712.3
CC(1/2)0.920
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.6293Crystals were produced under the conditions of 1.6 M ammonium sulfate, 50 mM sodium acetate, pH 4.6; buffer exchange was performed under the conditions of 26 % PEG 3350, 5 mM CoCl2 and 50 mM sodium acetate, pH 4.6; Crystals were soaked with MVAPP (200 micromole), followed by ATPgS (200 micromole). Then condensation was conducted at 30 % PEG 3350, 15% PEG 400, 5 mM CoCl2, 50 mM sodium acetate, pH 4.6

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