6DR7
YopH PTP1B WPD loop Chimera 2 PTPase bound to vanadate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.127 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.697, 54.731, 96.537 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.186 - 1.849 |
R-factor | 0.1753 |
Rwork | 0.173 |
R-free | 0.20840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 4YAA |
RMSD bond length | 0.006 |
RMSD bond angle | 0.793 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.920 |
High resolution limit [Å] | 1.849 | 3.990 | 1.850 |
Rmerge | 0.158 | 0.086 | 1.615 |
Rmeas | 0.167 | 0.092 | 1.712 |
Rpim | 0.054 | 0.030 | 0.561 |
Number of reflections | 23225 | 2504 | 2256 |
<I/σ(I)> | 5.9 | 1.6 | |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 9.2 | 8.8 | 9.1 |
CC(1/2) | 0.996 | 0.607 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7.5 | 298 | Hepes, PEG 3350 |