6DJ9
Structure of the USP15 DUSP domain in complex with a high-affinity Ubiquitin Variant (UbV)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-10-23 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.97918 |
| Spacegroup name | P 63 |
| Unit cell lengths | 152.410, 152.410, 125.461 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 90.935 - 3.100 |
| R-factor | 0.2548 |
| Rwork | 0.253 |
| R-free | 0.26720 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDB 4A3O |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.650 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 90.935 | 3.090 |
| High resolution limit [Å] | 2.930 | 2.930 |
| Rmerge | 0.102 | 1.463 |
| Rmeas | 0.113 | 1.621 |
| Rpim | 0.049 | 0.694 |
| Number of reflections | 69830 | 10150 |
| <I/σ(I)> | 8.8 | 1.2 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 5.3 | 5.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5 | 298 | 16% PEG6K, 100 mM Sodium Citrate, pH 5.0, 100 mM MgCl2, cryoprotected in 20% PEG6K, 100 mM Sodium Citrate, pH 5.0, 100 mM MgCl2, 30% ethylene glycol |






