6DGM

Streptococcus pyogenes phosphoglycerol transferase GacH in complex with sn-glycerol-1-phosphate

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SSRL BEAMLINE BL9-2
Synchrotron site	SSRL
Beamline	BL9-2
Temperature [K]	100
Detector technology	PIXEL
Collection date	2018-05-13
Detector	DECTRIS PILATUS 6M
Wavelength(s)	0.97946
Spacegroup name	P 21 21 21
Unit cell lengths	74.650, 82.970, 130.360
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	39.532 - 1.490
R-factor	0.154
Rwork	0.153
R-free	0.17540
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	5u9z
Data reduction software	XDS (VERSION Jan 26, 2018 BUILT=20180126)
Data scaling software	XSCALE (VERSION Jan 26, 2018 BUILT=20180126)
Phasing software	PHASER (2.8.2)
Refinement software	PHENIX (dev_3139)

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	39.532	39.532	1.530
High resolution limit [Å]	1.490	6.660	1.490
Rmerge	0.080	0.020	1.143
Rmeas	0.086	0.022	1.281
Number of reflections	127541	1610	7144
<I/σ(I)>	14.23	55.96	1.2
Completeness [%]	96.3	97.3	73.4
Redundancy	6.488	6.067	4.963
CC(1/2)	0.999	1.000	0.496

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP	6	291	0.2M calcium acetate, 0.1M MES pH 6.0, 20% PEG8000, 0.01M sn-glycerol-1-phosphate