Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DDJ

Crystal Structure of the human BRD2 BD2 bromodimain in complex with a Tetrahydroquinoline analogue

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-12-12
DetectorRAYONIX MX300-HS
Wavelength(s)1.0
Spacegroup nameP 21 21 2
Unit cell lengths52.357, 72.328, 32.004
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.004 - 1.050
R-factor0.116
Rwork0.116
R-free0.12920
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ig6
RMSD bond length0.009
RMSD bond angle1.047
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.070
High resolution limit [Å]1.0492.6501.050
Rmerge0.0770.0500.573
Rmeas0.0800.0520.612
Rpim0.0220.0150.210
Number of reflections5656438183341
<I/σ(I)>38.7
Completeness [%]98.298.593.7
Redundancy1312.87.5
CC(1/2)0.9980.836
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5291.15HEHPES, PEG3000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon