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6D3N

Crystal structure of h4-1BB ligand

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-13
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97
Spacegroup nameH 3 2
Unit cell lengths73.167, 73.167, 162.814
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution59.050 - 2.700
R-factor0.2119
Rwork0.208
R-free0.25230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6cpr
RMSD bond length0.008
RMSD bond angle1.267
Data reduction softwareiMOSFLM
Data scaling softwareSCALA (0.6.3)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]59.05059.0502.830
High resolution limit [Å]2.7008.9602.700
Rmerge0.0950.0720.859
Rmeas0.1010.0780.913
Rpim0.0330.0280.303
Total number of observations44504
Number of reflections4818157630
<I/σ(I)>11.6
Completeness [%]99.698.599.4
Redundancy9.27.98.4
CC(1/2)0.9960.9930.927
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.62950.085M tri- Na citrate, pH 5.6, 25.5% PEG 4000 0.17M Amm acetate 15% glycerol

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