6D3L
Crystal structure of unphosphorylated human PKR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.978971 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 92.689, 92.689, 123.325 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 123.330 - 3.100 |
R-factor | 0.2629 |
Rwork | 0.259 |
R-free | 0.34700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2a19 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.560 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.28) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 123.330 | 3.310 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.259 | 1.133 |
Rmeas | 0.267 | 1.163 |
Rpim | 0.063 | 0.263 |
Number of reflections | 6130 | 1065 |
<I/σ(I)> | 9.1 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 17.9 | 19.3 |
CC(1/2) | 0.997 | 0.677 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.1 M Bis-Tris, pH 5.5, 2.0 M ammonium sulfate, 1:3 molar ratio of dp8 (heparin) was added to protein prior to crystallization |