6D1R
Structure of Staphylococcus aureus RNase P protein at 2.0 angstrom
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2018-02-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 72.159, 72.159, 58.958 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.246 - 1.995 |
R-factor | 0.2161 |
Rwork | 0.214 |
R-free | 0.23430 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | HKL-2000 |
Data scaling software | Aimless (0.6.2) |
Phasing software | PHASER (2.7.16) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.070 |
High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
Rmerge | 0.085 | 0.039 | 1.216 |
Rmeas | 0.090 | 0.042 | 1.287 |
Rpim | 0.030 | 0.014 | 0.418 |
Total number of observations | 111835 | ||
Number of reflections | 12313 | 1319 | 1214 |
<I/σ(I)> | 7.3 | ||
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 9.1 | 8.6 | 9.4 |
CC(1/2) | 0.998 | 0.625 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298.15 | 3.3M (NH4)2SO4, 0.15M potassium phosphate pH6.5 |