6D0Q
Structure of a DNA retention-prone PCNA variant
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-03-31 |
| Detector | RIGAKU SATURN 944 |
| Wavelength(s) | 1.54178 |
| Spacegroup name | P 21 3 |
| Unit cell lengths | 122.264, 122.264, 122.264 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 33.910 - 2.801 |
| R-factor | 0.243303038576 |
| Rwork | 0.242 |
| R-free | 0.26913 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4yhr |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.950 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 (v703x) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.850 |
| High resolution limit [Å] | 2.800 | 2.800 |
| Rmerge | 0.093 | 1.154 |
| Rmeas | 0.098 | 1.208 |
| Rpim | 0.029 | 0.354 |
| Number of reflections | 15284 | 757 |
| <I/σ(I)> | 27.54 | 1.65 |
| Completeness [%] | 99.9 | 100 |
| Redundancy | 11.5 | 11.5 |
| CC(1/2) | 0.996 | 0.842 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 298 | 50 mM sodium citrate pH 5.6, 2 M (NH4)2SO4 |






